Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.82■■□□□ 1.4
Apba3O88888 Gm9959-201ENSMUST00000068277 390 ntBASIC23.82■■□□□ 1.4
Apba3O88888 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Apba3O88888 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Apba3O88888 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Apba3O88888 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Apba3O88888 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Apba3O88888 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Apba3O88888 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Apba3O88888 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Apba3O88888 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Apba3O88888 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Apba3O88888 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.8■■□□□ 1.4
Apba3O88888 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Apba3O88888 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.8■■□□□ 1.4
Apba3O88888 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apba3O88888 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apba3O88888 Gm45102-201ENSMUST00000207427 857 ntBASIC23.79■■□□□ 1.4
Apba3O88888 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.79■■□□□ 1.4
Apba3O88888 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apba3O88888 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apba3O88888 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apba3O88888 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Apba3O88888 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apba3O88888 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Apba3O88888 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.78■■□□□ 1.4
Apba3O88888 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Apba3O88888 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.77■■□□□ 1.4
Apba3O88888 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Apba3O88888 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.77■■□□□ 1.4
Apba3O88888 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.77■■□□□ 1.4
Apba3O88888 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.76■■□□□ 1.39
Apba3O88888 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apba3O88888 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apba3O88888 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.76■■□□□ 1.39
Apba3O88888 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apba3O88888 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Apba3O88888 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apba3O88888 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apba3O88888 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apba3O88888 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Apba3O88888 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.74■■□□□ 1.39
Apba3O88888 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Apba3O88888 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apba3O88888 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apba3O88888 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Apba3O88888 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Apba3O88888 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.73■■□□□ 1.39
Apba3O88888 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Apba3O88888 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Apba3O88888 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Apba3O88888 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Apba3O88888 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Apba3O88888 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.72■■□□□ 1.39
Apba3O88888 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Apba3O88888 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.71■■□□□ 1.39
Apba3O88888 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Apba3O88888 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Apba3O88888 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Apba3O88888 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Apba3O88888 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Apba3O88888 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.7■■□□□ 1.38
Apba3O88888 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.7■■□□□ 1.38
Apba3O88888 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
Apba3O88888 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Apba3O88888 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Apba3O88888 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.69■■□□□ 1.38
Apba3O88888 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Apba3O88888 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Apba3O88888 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Apba3O88888 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Apba3O88888 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.67■■□□□ 1.38
Apba3O88888 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Apba3O88888 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Apba3O88888 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.67■■□□□ 1.38
Apba3O88888 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Apba3O88888 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Apba3O88888 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Apba3O88888 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Apba3O88888 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Apba3O88888 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Apba3O88888 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Apba3O88888 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.66■■□□□ 1.38
Apba3O88888 Etf1-202ENSMUST00000180351 108 ntBASIC23.66■■□□□ 1.38
Apba3O88888 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Apba3O88888 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Apba3O88888 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.65■■□□□ 1.38
Apba3O88888 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Apba3O88888 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Apba3O88888 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Apba3O88888 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Apba3O88888 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Apba3O88888 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Apba3O88888 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
Apba3O88888 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.63■■□□□ 1.37
Apba3O88888 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Apba3O88888 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.63■■□□□ 1.37
Apba3O88888 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.63■■□□□ 1.37
Apba3O88888 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Apba3O88888 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms