Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf17O88472 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf17O88472 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf17O88472 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf17O88472 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf17O88472 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf17O88472 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf17O88472 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf17O88472 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf17O88472 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf17O88472 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf17O88472 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf17O88472 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf17O88472 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.34■□□□□ 0.85
Tnfrsf17O88472 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.34■□□□□ 0.85
Tnfrsf17O88472 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Tnfrsf17O88472 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfrsf17O88472 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf17O88472 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf17O88472 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf17O88472 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf17O88472 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf17O88472 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.33■□□□□ 0.85
Tnfrsf17O88472 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf17O88472 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf17O88472 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf17O88472 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfrsf17O88472 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf17O88472 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf17O88472 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf17O88472 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf17O88472 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Tnfrsf17O88472 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf17O88472 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf17O88472 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf17O88472 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf17O88472 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
Tnfrsf17O88472 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf17O88472 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.31■□□□□ 0.84
Tnfrsf17O88472 Gm6139-201ENSMUST00000079261 882 ntBASIC20.31■□□□□ 0.84
Tnfrsf17O88472 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Tnfrsf17O88472 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf17O88472 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf17O88472 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf17O88472 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tnfrsf17O88472 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Tnfrsf17O88472 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tnfrsf17O88472 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.29■□□□□ 0.84
Tnfrsf17O88472 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf17O88472 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf17O88472 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf17O88472 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf17O88472 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf17O88472 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf17O88472 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf17O88472 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf17O88472 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.28■□□□□ 0.84
Tnfrsf17O88472 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.28■□□□□ 0.84
Tnfrsf17O88472 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf17O88472 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf17O88472 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf17O88472 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.27■□□□□ 0.84
Tnfrsf17O88472 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.27■□□□□ 0.84
Tnfrsf17O88472 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Tnfrsf17O88472 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Tnfrsf17O88472 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfrsf17O88472 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.26■□□□□ 0.83
Tnfrsf17O88472 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Tnfrsf17O88472 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf17O88472 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf17O88472 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf17O88472 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.24■□□□□ 0.83
Tnfrsf17O88472 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms