Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a6O35544 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc1a6O35544 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.29■■□□□ 1
Slc1a6O35544 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.29■■□□□ 1
Slc1a6O35544 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc1a6O35544 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.29■■□□□ 1
Slc1a6O35544 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Slc1a6O35544 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Slc1a6O35544 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc1a6O35544 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc1a6O35544 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc1a6O35544 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.28■■□□□ 1
Slc1a6O35544 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc1a6O35544 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc1a6O35544 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc1a6O35544 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc1a6O35544 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc1a6O35544 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc1a6O35544 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Slc1a6O35544 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Slc1a6O35544 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Slc1a6O35544 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc1a6O35544 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Slc1a6O35544 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc1a6O35544 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc1a6O35544 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc1a6O35544 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Slc1a6O35544 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Slc1a6O35544 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Slc1a6O35544 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc1a6O35544 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc1a6O35544 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc1a6O35544 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Slc1a6O35544 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc1a6O35544 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Slc1a6O35544 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc1a6O35544 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc1a6O35544 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc1a6O35544 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc1a6O35544 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc1a6O35544 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc1a6O35544 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc1a6O35544 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Slc1a6O35544 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc1a6O35544 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc1a6O35544 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc1a6O35544 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc1a6O35544 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.23■□□□□ 0.99
Slc1a6O35544 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc1a6O35544 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc1a6O35544 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.23■□□□□ 0.99
Slc1a6O35544 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc1a6O35544 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc1a6O35544 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Slc1a6O35544 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
Slc1a6O35544 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Slc1a6O35544 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc1a6O35544 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc1a6O35544 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc1a6O35544 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc1a6O35544 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc1a6O35544 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.22■□□□□ 0.99
Slc1a6O35544 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Slc1a6O35544 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc1a6O35544 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc1a6O35544 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc1a6O35544 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc1a6O35544 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc1a6O35544 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc1a6O35544 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Slc1a6O35544 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc1a6O35544 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc1a6O35544 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Slc1a6O35544 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.2■□□□□ 0.98
Slc1a6O35544 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc1a6O35544 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc1a6O35544 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Slc1a6O35544 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc1a6O35544 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc1a6O35544 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc1a6O35544 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc1a6O35544 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.18■□□□□ 0.98
Slc1a6O35544 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc1a6O35544 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.17■□□□□ 0.98
Slc1a6O35544 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.17■□□□□ 0.98
Slc1a6O35544 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc1a6O35544 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc1a6O35544 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Slc1a6O35544 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.17■□□□□ 0.98
Slc1a6O35544 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc1a6O35544 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc1a6O35544 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc1a6O35544 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Slc1a6O35544 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc1a6O35544 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc1a6O35544 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc1a6O35544 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc1a6O35544 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc1a6O35544 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc1a6O35544 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms