Protein–RNA interactions for Protein: O35516

Notch2, Neurogenic locus notch homolog protein 2, mousemouse

Predictions only

Length 2,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch2O35516 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Notch2O35516 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Notch2O35516 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Notch2O35516 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Notch2O35516 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Notch2O35516 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Notch2O35516 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Notch2O35516 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Notch2O35516 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.31■□□□□ 0.36
Notch2O35516 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Notch2O35516 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Notch2O35516 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Notch2O35516 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Notch2O35516 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Notch2O35516 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Notch2O35516 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.3■□□□□ 0.36
Notch2O35516 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Notch2O35516 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Notch2O35516 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Notch2O35516 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.29■□□□□ 0.36
Notch2O35516 Gm27801-201ENSMUST00000184174 223 ntBASIC17.29■□□□□ 0.36
Notch2O35516 Gm42569-201ENSMUST00000200539 472 ntBASIC17.29■□□□□ 0.36
Notch2O35516 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Notch2O35516 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Notch2O35516 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.29■□□□□ 0.36
Notch2O35516 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Notch2O35516 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Notch2O35516 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.28■□□□□ 0.36
Notch2O35516 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Notch2O35516 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Notch2O35516 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.28■□□□□ 0.36
Notch2O35516 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Notch2O35516 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.27■□□□□ 0.36
Notch2O35516 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.27■□□□□ 0.36
Notch2O35516 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.27■□□□□ 0.36
Notch2O35516 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.27■□□□□ 0.36
Notch2O35516 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Notch2O35516 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.27■□□□□ 0.35
Notch2O35516 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Notch2O35516 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
Notch2O35516 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.26■□□□□ 0.35
Notch2O35516 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Notch2O35516 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.25■□□□□ 0.35
Notch2O35516 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Notch2O35516 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Notch2O35516 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.25■□□□□ 0.35
Notch2O35516 Mir7075-201ENSMUST00000184187 82 ntBASIC17.25■□□□□ 0.35
Notch2O35516 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.25■□□□□ 0.35
Notch2O35516 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Notch2O35516 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Notch2O35516 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Notch2O35516 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Notch2O35516 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Notch2O35516 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Notch2O35516 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Notch2O35516 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Notch2O35516 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Notch2O35516 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.23■□□□□ 0.35
Notch2O35516 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Notch2O35516 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Notch2O35516 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.22■□□□□ 0.35
Notch2O35516 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Notch2O35516 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Notch2O35516 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.22■□□□□ 0.35
Notch2O35516 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Notch2O35516 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Notch2O35516 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.21■□□□□ 0.35
Notch2O35516 Gm42642-201ENSMUST00000200683 355 ntBASIC17.21■□□□□ 0.35
Notch2O35516 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Notch2O35516 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Notch2O35516 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.21■□□□□ 0.35
Notch2O35516 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Notch2O35516 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.21■□□□□ 0.34
Notch2O35516 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.21■□□□□ 0.34
Notch2O35516 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Notch2O35516 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Notch2O35516 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Notch2O35516 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Notch2O35516 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.2■□□□□ 0.34
Notch2O35516 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Notch2O35516 Mir7071-201ENSMUST00000184847 69 ntBASIC17.19■□□□□ 0.34
Notch2O35516 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Notch2O35516 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Notch2O35516 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Notch2O35516 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Notch2O35516 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Notch2O35516 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Notch2O35516 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.18■□□□□ 0.34
Notch2O35516 Gm10399-202ENSMUST00000202768 748 ntBASIC17.18■□□□□ 0.34
Notch2O35516 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Notch2O35516 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Notch2O35516 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Notch2O35516 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Notch2O35516 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Notch2O35516 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Notch2O35516 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Notch2O35516 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Notch2O35516 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Notch2O35516 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Notch2O35516 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms