Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.85■□□□□ 0.77
Capn1O35350 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.85■□□□□ 0.77
Capn1O35350 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Capn1O35350 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.85■□□□□ 0.77
Capn1O35350 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Capn1O35350 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Capn1O35350 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Capn1O35350 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Capn1O35350 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Capn1O35350 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Capn1O35350 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Capn1O35350 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.84■□□□□ 0.77
Capn1O35350 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Capn1O35350 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Capn1O35350 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Capn1O35350 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Capn1O35350 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Capn1O35350 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.83■□□□□ 0.77
Capn1O35350 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Capn1O35350 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Capn1O35350 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.82■□□□□ 0.76
Capn1O35350 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Capn1O35350 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Capn1O35350 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.82■□□□□ 0.76
Capn1O35350 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Capn1O35350 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Capn1O35350 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Capn1O35350 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Capn1O35350 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Capn1O35350 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Capn1O35350 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Capn1O35350 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Capn1O35350 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Capn1O35350 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Capn1O35350 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Capn1O35350 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.81■□□□□ 0.76
Capn1O35350 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Capn1O35350 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Capn1O35350 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Capn1O35350 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Capn1O35350 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Capn1O35350 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Capn1O35350 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Capn1O35350 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Capn1O35350 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Capn1O35350 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Capn1O35350 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Capn1O35350 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.78■□□□□ 0.76
Capn1O35350 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Capn1O35350 Rps24-207ENSMUST00000224568 714 ntBASIC19.78■□□□□ 0.76
Capn1O35350 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Capn1O35350 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Capn1O35350 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Capn1O35350 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Capn1O35350 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Capn1O35350 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.77■□□□□ 0.76
Capn1O35350 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Capn1O35350 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Capn1O35350 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Capn1O35350 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Capn1O35350 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.76■□□□□ 0.75
Capn1O35350 Gm45102-201ENSMUST00000207427 857 ntBASIC19.76■□□□□ 0.75
Capn1O35350 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Capn1O35350 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Capn1O35350 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Capn1O35350 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Capn1O35350 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Capn1O35350 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Capn1O35350 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Capn1O35350 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Capn1O35350 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.74■□□□□ 0.75
Capn1O35350 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Capn1O35350 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Capn1O35350 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Capn1O35350 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.74■□□□□ 0.75
Capn1O35350 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Capn1O35350 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Capn1O35350 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Capn1O35350 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Capn1O35350 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Capn1O35350 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Capn1O35350 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.73■□□□□ 0.75
Capn1O35350 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.73■□□□□ 0.75
Capn1O35350 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Capn1O35350 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Capn1O35350 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Capn1O35350 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.73■□□□□ 0.75
Capn1O35350 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Capn1O35350 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Capn1O35350 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Capn1O35350 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms