Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.67■■□□□ 1.22
Ccdc188F6WEU2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
Ccdc188F6WEU2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc188F6WEU2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.66■■□□□ 1.22
Ccdc188F6WEU2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Ccdc188F6WEU2 Gm26571-201ENSMUST00000181399 666 ntBASIC22.66■■□□□ 1.22
Ccdc188F6WEU2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc188F6WEU2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.66■■□□□ 1.22
Ccdc188F6WEU2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc188F6WEU2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc188F6WEU2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 Gm10399-202ENSMUST00000202768 748 ntBASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc188F6WEU2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.64■■□□□ 1.22
Ccdc188F6WEU2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ccdc188F6WEU2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ccdc188F6WEU2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.64■■□□□ 1.21
Ccdc188F6WEU2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc188F6WEU2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc188F6WEU2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.62■■□□□ 1.21
Ccdc188F6WEU2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ccdc188F6WEU2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc188F6WEU2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc188F6WEU2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc188F6WEU2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc188F6WEU2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc188F6WEU2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.6■■□□□ 1.21
Ccdc188F6WEU2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc188F6WEU2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc188F6WEU2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc188F6WEU2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc188F6WEU2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc188F6WEU2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc188F6WEU2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc188F6WEU2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc188F6WEU2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Ccdc188F6WEU2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc188F6WEU2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.57■■□□□ 1.2
Ccdc188F6WEU2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ccdc188F6WEU2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc188F6WEU2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc188F6WEU2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.56■■□□□ 1.2
Ccdc188F6WEU2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc188F6WEU2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
Ccdc188F6WEU2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc188F6WEU2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc188F6WEU2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc188F6WEU2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc188F6WEU2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc188F6WEU2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc188F6WEU2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc188F6WEU2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc188F6WEU2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc188F6WEU2 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.54■■□□□ 1.2
Ccdc188F6WEU2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 Gm27405-201ENSMUST00000184201 112 ntBASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc188F6WEU2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc188F6WEU2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc188F6WEU2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc188F6WEU2 Gm42569-201ENSMUST00000200539 472 ntBASIC22.51■■□□□ 1.19
Ccdc188F6WEU2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ccdc188F6WEU2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Ccdc188F6WEU2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Ccdc188F6WEU2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ccdc188F6WEU2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ccdc188F6WEU2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ccdc188F6WEU2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ccdc188F6WEU2 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.49■■□□□ 1.19
Ccdc188F6WEU2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.49■■□□□ 1.19
Ccdc188F6WEU2 Mir7075-201ENSMUST00000184187 82 ntBASIC22.49■■□□□ 1.19
Ccdc188F6WEU2 Gm43137-201ENSMUST00000198052 594 ntBASIC22.49■■□□□ 1.19
Ccdc188F6WEU2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
Ccdc188F6WEU2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ccdc188F6WEU2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc188F6WEU2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc188F6WEU2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc188F6WEU2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc188F6WEU2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc188F6WEU2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms