Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Ift140E9PY46 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC35.52■■■■□ 3.28
Ift140E9PY46 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC35.52■■■■□ 3.28
Ift140E9PY46 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC35.52■■■■□ 3.28
Ift140E9PY46 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Ift140E9PY46 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC35.5■■■■□ 3.27
Ift140E9PY46 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
Ift140E9PY46 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Ift140E9PY46 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC35.5■■■■□ 3.27
Ift140E9PY46 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Ift140E9PY46 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Ift140E9PY46 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC35.48■■■■□ 3.27
Ift140E9PY46 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC35.48■■■■□ 3.27
Ift140E9PY46 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Ift140E9PY46 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC35.48■■■■□ 3.27
Ift140E9PY46 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Ift140E9PY46 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Ift140E9PY46 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Ift140E9PY46 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Ift140E9PY46 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Ift140E9PY46 Gm8093-201ENSMUST00000128935 1892 ntBASIC35.46■■■■□ 3.27
Ift140E9PY46 Gm29257-201ENSMUST00000186115 639 ntBASIC35.45■■■■□ 3.27
Ift140E9PY46 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Ift140E9PY46 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC35.45■■■■□ 3.26
Ift140E9PY46 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC35.44■■■■□ 3.26
Ift140E9PY46 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Ift140E9PY46 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Ift140E9PY46 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Ift140E9PY46 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Ift140E9PY46 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Ift140E9PY46 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC35.43■■■■□ 3.26
Ift140E9PY46 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC35.42■■■■□ 3.26
Ift140E9PY46 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Ift140E9PY46 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC35.42■■■■□ 3.26
Ift140E9PY46 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
Ift140E9PY46 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Ift140E9PY46 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC35.41■■■■□ 3.26
Ift140E9PY46 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Ift140E9PY46 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Ift140E9PY46 Gm6206-201ENSMUST00000133472 2199 ntBASIC35.4■■■■□ 3.26
Ift140E9PY46 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
Ift140E9PY46 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC35.4■■■■□ 3.26
Ift140E9PY46 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Ift140E9PY46 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC35.4■■■■□ 3.26
Ift140E9PY46 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
Ift140E9PY46 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
Ift140E9PY46 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Ift140E9PY46 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Ift140E9PY46 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Ift140E9PY46 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Ift140E9PY46 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC35.37■■■■□ 3.25
Ift140E9PY46 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Ift140E9PY46 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Ift140E9PY46 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Ift140E9PY46 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC35.36■■■■□ 3.25
Ift140E9PY46 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Ift140E9PY46 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC35.36■■■■□ 3.25
Ift140E9PY46 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC35.36■■■■□ 3.25
Ift140E9PY46 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Ift140E9PY46 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Ift140E9PY46 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Ift140E9PY46 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Ift140E9PY46 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC35.35■■■■□ 3.25
Ift140E9PY46 AC164629.5-201ENSMUST00000220387 632 ntBASIC35.35■■■■□ 3.25
Ift140E9PY46 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC35.35■■■■□ 3.25
Ift140E9PY46 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Ift140E9PY46 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC35.34■■■■□ 3.25
Ift140E9PY46 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Ift140E9PY46 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
Ift140E9PY46 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
Ift140E9PY46 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC35.34■■■■□ 3.25
Ift140E9PY46 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC35.33■■■■□ 3.25
Ift140E9PY46 Gm28731-201ENSMUST00000185564 1569 ntBASIC35.32■■■■□ 3.25
Ift140E9PY46 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC35.32■■■■□ 3.25
Ift140E9PY46 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC35.32■■■■□ 3.24
Ift140E9PY46 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Ift140E9PY46 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
Ift140E9PY46 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
Ift140E9PY46 Gm6139-201ENSMUST00000079261 882 ntBASIC35.31■■■■□ 3.24
Ift140E9PY46 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
Ift140E9PY46 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Ift140E9PY46 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC35.3■■■■□ 3.24
Ift140E9PY46 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Ift140E9PY46 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Ift140E9PY46 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC35.28■■■■□ 3.24
Ift140E9PY46 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Ift140E9PY46 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC35.28■■■■□ 3.24
Ift140E9PY46 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC35.28■■■■□ 3.24
Ift140E9PY46 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC35.28■■■■□ 3.24
Ift140E9PY46 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Ift140E9PY46 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Ift140E9PY46 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC35.27■■■■□ 3.24
Ift140E9PY46 AC153524.1-201ENSMUST00000220436 1935 ntBASIC35.27■■■■□ 3.24
Ift140E9PY46 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC35.27■■■■□ 3.24
Ift140E9PY46 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC35.26■■■■□ 3.23
Ift140E9PY46 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
Ift140E9PY46 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
Ift140E9PY46 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Ift140E9PY46 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Ift140E9PY46 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC35.25■■■■□ 3.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms