Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd3B1AR17 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd3B1AR17 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd3B1AR17 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chd3B1AR17 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chd3B1AR17 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chd3B1AR17 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.4■■□□□ 1.02
Chd3B1AR17 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Chd3B1AR17 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Chd3B1AR17 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chd3B1AR17 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chd3B1AR17 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.39■■□□□ 1.01
Chd3B1AR17 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.39■■□□□ 1.01
Chd3B1AR17 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chd3B1AR17 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chd3B1AR17 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.38■■□□□ 1.01
Chd3B1AR17 Gm9959-201ENSMUST00000068277 390 ntBASIC21.38■■□□□ 1.01
Chd3B1AR17 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chd3B1AR17 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.38■■□□□ 1.01
Chd3B1AR17 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chd3B1AR17 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Chd3B1AR17 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chd3B1AR17 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chd3B1AR17 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chd3B1AR17 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.36■■□□□ 1.01
Chd3B1AR17 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.36■■□□□ 1.01
Chd3B1AR17 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chd3B1AR17 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chd3B1AR17 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chd3B1AR17 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.35■■□□□ 1.01
Chd3B1AR17 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Chd3B1AR17 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.35■■□□□ 1.01
Chd3B1AR17 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chd3B1AR17 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Chd3B1AR17 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd3B1AR17 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd3B1AR17 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Chd3B1AR17 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd3B1AR17 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chd3B1AR17 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.33■■□□□ 1.01
Chd3B1AR17 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.33■■□□□ 1.01
Chd3B1AR17 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd3B1AR17 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.33■■□□□ 1
Chd3B1AR17 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd3B1AR17 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd3B1AR17 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd3B1AR17 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd3B1AR17 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Chd3B1AR17 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.32■■□□□ 1
Chd3B1AR17 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd3B1AR17 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Chd3B1AR17 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Chd3B1AR17 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Chd3B1AR17 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd3B1AR17 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.31■■□□□ 1
Chd3B1AR17 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd3B1AR17 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.31■■□□□ 1
Chd3B1AR17 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Chd3B1AR17 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd3B1AR17 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd3B1AR17 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd3B1AR17 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd3B1AR17 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.3■■□□□ 1
Chd3B1AR17 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.3■■□□□ 1
Chd3B1AR17 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd3B1AR17 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Chd3B1AR17 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chd3B1AR17 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Chd3B1AR17 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd3B1AR17 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd3B1AR17 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd3B1AR17 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd3B1AR17 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd3B1AR17 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd3B1AR17 Gm45102-201ENSMUST00000207427 857 ntBASIC21.28■■□□□ 1
Chd3B1AR17 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd3B1AR17 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.28■■□□□ 1
Chd3B1AR17 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd3B1AR17 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd3B1AR17 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd3B1AR17 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chd3B1AR17 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd3B1AR17 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd3B1AR17 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chd3B1AR17 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Chd3B1AR17 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chd3B1AR17 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chd3B1AR17 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Chd3B1AR17 Rps24-207ENSMUST00000224568 714 ntBASIC21.25■□□□□ 0.99
Chd3B1AR17 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd3B1AR17 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.25■□□□□ 0.99
Chd3B1AR17 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Chd3B1AR17 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Chd3B1AR17 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd3B1AR17 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.24■□□□□ 0.99
Chd3B1AR17 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd3B1AR17 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd3B1AR17 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd3B1AR17 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd3B1AR17 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms