Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav13n-4A0A0G2JG01 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav13n-4A0A0G2JG01 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13n-4A0A0G2JG01 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13n-4A0A0G2JG01 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.35■□□□□ 0.37
Trav13n-4A0A0G2JG01 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13n-4A0A0G2JG01 Gm22567-201ENSMUST00000175542 342 ntBASIC17.35■□□□□ 0.37
Trav13n-4A0A0G2JG01 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13n-4A0A0G2JG01 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav13n-4A0A0G2JG01 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trav13n-4A0A0G2JG01 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13n-4A0A0G2JG01 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13n-4A0A0G2JG01 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav13n-4A0A0G2JG01 Gm15546-201ENSMUST00000122095 826 ntBASIC17.33■□□□□ 0.36
Trav13n-4A0A0G2JG01 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-4A0A0G2JG01 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.33■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gm44428-201ENSMUST00000204474 874 ntBASIC17.33■□□□□ 0.36
Trav13n-4A0A0G2JG01 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-4A0A0G2JG01 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-4A0A0G2JG01 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-4A0A0G2JG01 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trav13n-4A0A0G2JG01 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13n-4A0A0G2JG01 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.32■□□□□ 0.36
Trav13n-4A0A0G2JG01 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13n-4A0A0G2JG01 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13n-4A0A0G2JG01 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-4A0A0G2JG01 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13n-4A0A0G2JG01 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13n-4A0A0G2JG01 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Trav13n-4A0A0G2JG01 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13n-4A0A0G2JG01 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13n-4A0A0G2JG01 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13n-4A0A0G2JG01 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13n-4A0A0G2JG01 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.29■□□□□ 0.36
Trav13n-4A0A0G2JG01 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav13n-4A0A0G2JG01 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13n-4A0A0G2JG01 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav13n-4A0A0G2JG01 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav13n-4A0A0G2JG01 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav13n-4A0A0G2JG01 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13n-4A0A0G2JG01 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav13n-4A0A0G2JG01 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.27■□□□□ 0.36
Trav13n-4A0A0G2JG01 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13n-4A0A0G2JG01 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13n-4A0A0G2JG01 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms