Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav13n-2A0A0G2JF93 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.25□□□□□ -0.13
Trav13n-2A0A0G2JF93 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-2A0A0G2JF93 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-2A0A0G2JF93 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-2A0A0G2JF93 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13n-2A0A0G2JF93 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-2A0A0G2JF93 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-2A0A0G2JF93 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-2A0A0G2JF93 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-2A0A0G2JF93 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-2A0A0G2JF93 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-2A0A0G2JF93 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-2A0A0G2JF93 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav13n-2A0A0G2JF93 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-2A0A0G2JF93 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav13n-2A0A0G2JF93 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-2A0A0G2JF93 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-2A0A0G2JF93 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13n-2A0A0G2JF93 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13n-2A0A0G2JF93 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-2A0A0G2JF93 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-2A0A0G2JF93 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-2A0A0G2JF93 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-2A0A0G2JF93 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav13n-2A0A0G2JF93 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-2A0A0G2JF93 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-2A0A0G2JF93 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-2A0A0G2JF93 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-2A0A0G2JF93 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-2A0A0G2JF93 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-2A0A0G2JF93 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.19□□□□□ -0.14
Trav13n-2A0A0G2JF93 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13n-2A0A0G2JF93 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13n-2A0A0G2JF93 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-2A0A0G2JF93 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-2A0A0G2JF93 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-2A0A0G2JF93 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.18□□□□□ -0.14
Trav13n-2A0A0G2JF93 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-2A0A0G2JF93 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-2A0A0G2JF93 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-2A0A0G2JF93 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-2A0A0G2JF93 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-2A0A0G2JF93 Zfp131-205ENSMUST00000223812 663 ntBASIC14.16□□□□□ -0.14
Trav13n-2A0A0G2JF93 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.16□□□□□ -0.14
Trav13n-2A0A0G2JF93 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-2A0A0G2JF93 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-2A0A0G2JF93 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-2A0A0G2JF93 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-2A0A0G2JF93 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13n-2A0A0G2JF93 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Trav13n-2A0A0G2JF93 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav13n-2A0A0G2JF93 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-2A0A0G2JF93 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-2A0A0G2JF93 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-2A0A0G2JF93 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-2A0A0G2JF93 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-2A0A0G2JF93 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-2A0A0G2JF93 Gm24970-201ENSMUST00000175582 82 ntBASIC14.13□□□□□ -0.15
Trav13n-2A0A0G2JF93 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms