Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trav11A0A0B4J1J9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav11A0A0B4J1J9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav11A0A0B4J1J9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Trav11A0A0B4J1J9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav11A0A0B4J1J9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav11A0A0B4J1J9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav11A0A0B4J1J9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav11A0A0B4J1J9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav11A0A0B4J1J9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav11A0A0B4J1J9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav11A0A0B4J1J9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav11A0A0B4J1J9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav11A0A0B4J1J9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav11A0A0B4J1J9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav11A0A0B4J1J9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Gm4799-201ENSMUST00000095396 657 ntBASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.73□□□□□ -0.05
Trav11A0A0B4J1J9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav11A0A0B4J1J9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav11A0A0B4J1J9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav11A0A0B4J1J9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav11A0A0B4J1J9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav11A0A0B4J1J9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav11A0A0B4J1J9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav11A0A0B4J1J9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav11A0A0B4J1J9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Gm6821-201ENSMUST00000107540 542 ntBASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav11A0A0B4J1J9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav11A0A0B4J1J9 Gm22567-201ENSMUST00000175542 342 ntBASIC14.69□□□□□ -0.06
Trav11A0A0B4J1J9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav11A0A0B4J1J9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav11A0A0B4J1J9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav11A0A0B4J1J9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav11A0A0B4J1J9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms