Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv20A0A0B4J1H5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.34■□□□□ 0.69
Trbv20A0A0B4J1H5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv20A0A0B4J1H5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trbv20A0A0B4J1H5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.34■□□□□ 0.69
Trbv20A0A0B4J1H5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Trbv20A0A0B4J1H5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv20A0A0B4J1H5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv20A0A0B4J1H5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv20A0A0B4J1H5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv20A0A0B4J1H5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv20A0A0B4J1H5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv20A0A0B4J1H5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv20A0A0B4J1H5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv20A0A0B4J1H5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv20A0A0B4J1H5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trbv20A0A0B4J1H5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv20A0A0B4J1H5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv20A0A0B4J1H5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv20A0A0B4J1H5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv20A0A0B4J1H5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv20A0A0B4J1H5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv20A0A0B4J1H5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv20A0A0B4J1H5 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.3■□□□□ 0.68
Trbv20A0A0B4J1H5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv20A0A0B4J1H5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Trbv20A0A0B4J1H5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trbv20A0A0B4J1H5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv20A0A0B4J1H5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv20A0A0B4J1H5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv20A0A0B4J1H5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trbv20A0A0B4J1H5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trbv20A0A0B4J1H5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv20A0A0B4J1H5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv20A0A0B4J1H5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.28■□□□□ 0.68
Trbv20A0A0B4J1H5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.28■□□□□ 0.68
Trbv20A0A0B4J1H5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv20A0A0B4J1H5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv20A0A0B4J1H5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
Trbv20A0A0B4J1H5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.27■□□□□ 0.68
Trbv20A0A0B4J1H5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv20A0A0B4J1H5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv20A0A0B4J1H5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv20A0A0B4J1H5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv20A0A0B4J1H5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.27■□□□□ 0.67
Trbv20A0A0B4J1H5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv20A0A0B4J1H5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv20A0A0B4J1H5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv20A0A0B4J1H5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv20A0A0B4J1H5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv20A0A0B4J1H5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv20A0A0B4J1H5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv20A0A0B4J1H5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trbv20A0A0B4J1H5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Trbv20A0A0B4J1H5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv20A0A0B4J1H5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms