Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Zfp131-205ENSMUST00000223812 663 ntBASIC16.87■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.87■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.86■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.86■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv13-3A0A0B4J1H2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.85■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.84■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.84■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Gm9397-201ENSMUST00000200125 605 ntBASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.82■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-3A0A0B4J1H2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trbv13-3A0A0B4J1H2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv13-3A0A0B4J1H2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Trbv13-3A0A0B4J1H2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms