Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6d-5A0A075B6B9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.48■□□□□ 0.39
Trav6d-5A0A075B6B9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav6d-5A0A075B6B9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6d-5A0A075B6B9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6d-5A0A075B6B9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-5A0A075B6B9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav6d-5A0A075B6B9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-5A0A075B6B9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-5A0A075B6B9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav6d-5A0A075B6B9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-5A0A075B6B9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-5A0A075B6B9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav6d-5A0A075B6B9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6d-5A0A075B6B9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6d-5A0A075B6B9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav6d-5A0A075B6B9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6d-5A0A075B6B9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav6d-5A0A075B6B9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6d-5A0A075B6B9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6d-5A0A075B6B9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Trav6d-5A0A075B6B9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6d-5A0A075B6B9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav6d-5A0A075B6B9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Gm9812-201ENSMUST00000061934 968 ntBASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-5A0A075B6B9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.44■□□□□ 0.38
Trav6d-5A0A075B6B9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6d-5A0A075B6B9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6d-5A0A075B6B9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trav6d-5A0A075B6B9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6d-5A0A075B6B9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav6d-5A0A075B6B9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Trav6d-5A0A075B6B9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6d-5A0A075B6B9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trav6d-5A0A075B6B9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.41■□□□□ 0.38
Trav6d-5A0A075B6B9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6d-5A0A075B6B9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav6d-5A0A075B6B9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6d-5A0A075B6B9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6d-5A0A075B6B9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6d-5A0A075B6B9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.4■□□□□ 0.38
Trav6d-5A0A075B6B9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Trav6d-5A0A075B6B9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6d-5A0A075B6B9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav6d-5A0A075B6B9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6d-5A0A075B6B9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6d-5A0A075B6B9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav6d-5A0A075B6B9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6d-5A0A075B6B9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6d-5A0A075B6B9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6d-5A0A075B6B9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6d-5A0A075B6B9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6d-5A0A075B6B9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav6d-5A0A075B6B9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 Gm4799-201ENSMUST00000095396 657 ntBASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6d-5A0A075B6B9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-5A0A075B6B9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-5A0A075B6B9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.37■□□□□ 0.37
Trav6d-5A0A075B6B9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-5A0A075B6B9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-5A0A075B6B9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6d-5A0A075B6B9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6d-5A0A075B6B9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav6d-5A0A075B6B9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.36■□□□□ 0.37
Trav6d-5A0A075B6B9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6d-5A0A075B6B9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-5A0A075B6B9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.35■□□□□ 0.37
Trav6d-5A0A075B6B9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Trav6d-5A0A075B6B9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav6d-5A0A075B6B9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-5A0A075B6B9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav6d-5A0A075B6B9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-5A0A075B6B9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6d-5A0A075B6B9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6d-5A0A075B6B9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms