Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-5A0A075B6B5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-5A0A075B6B5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-5A0A075B6B5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-5A0A075B6B5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-5A0A075B6B5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-5A0A075B6B5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-5A0A075B6B5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-5A0A075B6B5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-5A0A075B6B5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-5A0A075B6B5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-5A0A075B6B5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-5A0A075B6B5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-5A0A075B6B5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-5A0A075B6B5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-5A0A075B6B5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-5A0A075B6B5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-5A0A075B6B5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6-5A0A075B6B5 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-5A0A075B6B5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav6-5A0A075B6B5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trav6-5A0A075B6B5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-5A0A075B6B5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav6-5A0A075B6B5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-5A0A075B6B5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav6-5A0A075B6B5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav6-5A0A075B6B5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-5A0A075B6B5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav6-5A0A075B6B5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Trav6-5A0A075B6B5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-5A0A075B6B5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-5A0A075B6B5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-5A0A075B6B5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-5A0A075B6B5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-5A0A075B6B5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-5A0A075B6B5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-5A0A075B6B5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-5A0A075B6B5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav6-5A0A075B6B5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-5A0A075B6B5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-5A0A075B6B5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trav6-5A0A075B6B5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6-5A0A075B6B5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-5A0A075B6B5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav6-5A0A075B6B5 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.63■□□□□ 0.25
Trav6-5A0A075B6B5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-5A0A075B6B5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms