Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-3A0A075B6A4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-3A0A075B6A4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav12d-3A0A075B6A4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-3A0A075B6A4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-3A0A075B6A4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav12d-3A0A075B6A4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-3A0A075B6A4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-3A0A075B6A4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Golph3-202ENSMUST00000226517 2359 ntBASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-3A0A075B6A4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav12d-3A0A075B6A4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-3A0A075B6A4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav12d-3A0A075B6A4 Gm22567-201ENSMUST00000175542 342 ntBASIC16.16■□□□□ 0.18
Trav12d-3A0A075B6A4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-3A0A075B6A4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-3A0A075B6A4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-3A0A075B6A4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.14■□□□□ 0.17
Trav12d-3A0A075B6A4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav12d-3A0A075B6A4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-3A0A075B6A4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-3A0A075B6A4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav12d-3A0A075B6A4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-3A0A075B6A4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-3A0A075B6A4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-3A0A075B6A4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.11■□□□□ 0.17
Trav12d-3A0A075B6A4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-3A0A075B6A4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav12d-3A0A075B6A4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav12d-3A0A075B6A4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-3A0A075B6A4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-3A0A075B6A4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-3A0A075B6A4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-3A0A075B6A4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-3A0A075B6A4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trav12d-3A0A075B6A4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav12d-3A0A075B6A4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav12d-3A0A075B6A4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav12d-3A0A075B6A4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav12d-3A0A075B6A4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav12d-3A0A075B6A4 Gm16148-201ENSMUST00000119653 893 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms