Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4n-4A0A075B615 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.04■□□□□ -0
Trav4n-4A0A075B615 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav4n-4A0A075B615 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.04■□□□□ -0
Trav4n-4A0A075B615 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav4n-4A0A075B615 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav4n-4A0A075B615 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trav4n-4A0A075B615 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.03■□□□□ -0
Trav4n-4A0A075B615 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav4n-4A0A075B615 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4n-4A0A075B615 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav4n-4A0A075B615 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4n-4A0A075B615 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav4n-4A0A075B615 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav4n-4A0A075B615 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4n-4A0A075B615 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4n-4A0A075B615 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4n-4A0A075B615 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4n-4A0A075B615 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4n-4A0A075B615 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4n-4A0A075B615 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Gm22567-201ENSMUST00000175542 342 ntBASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav4n-4A0A075B615 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav4n-4A0A075B615 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4n-4A0A075B615 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav4n-4A0A075B615 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4n-4A0A075B615 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav4n-4A0A075B615 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4n-4A0A075B615 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4n-4A0A075B615 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4n-4A0A075B615 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4n-4A0A075B615 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4n-4A0A075B615 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4n-4A0A075B615 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4n-4A0A075B615 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4n-4A0A075B615 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4n-4A0A075B615 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav4n-4A0A075B615 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav4n-4A0A075B615 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4n-4A0A075B615 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4n-4A0A075B615 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4n-4A0A075B615 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4n-4A0A075B615 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4n-4A0A075B615 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav4n-4A0A075B615 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4n-4A0A075B615 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4n-4A0A075B615 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav4n-4A0A075B615 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav4n-4A0A075B615 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4n-4A0A075B615 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4n-4A0A075B615 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4n-4A0A075B615 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav4n-4A0A075B615 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Trav4n-4A0A075B615 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav4n-4A0A075B615 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trav4n-4A0A075B615 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4n-4A0A075B615 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4n-4A0A075B615 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4n-4A0A075B615 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4n-4A0A075B615 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4n-4A0A075B615 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav4n-4A0A075B615 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.91□□□□□ -0.02
Trav4n-4A0A075B615 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms