Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-5A0A075B604 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav7n-5A0A075B604 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-5A0A075B604 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-5A0A075B604 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-5A0A075B604 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-5A0A075B604 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav7n-5A0A075B604 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7n-5A0A075B604 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7n-5A0A075B604 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav7n-5A0A075B604 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7n-5A0A075B604 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-5A0A075B604 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-5A0A075B604 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Trav7n-5A0A075B604 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-5A0A075B604 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-5A0A075B604 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-5A0A075B604 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-5A0A075B604 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7n-5A0A075B604 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav7n-5A0A075B604 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7n-5A0A075B604 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7n-5A0A075B604 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav7n-5A0A075B604 Gm43566-201ENSMUST00000196851 808 ntBASIC17.73■□□□□ 0.43
Trav7n-5A0A075B604 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-5A0A075B604 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-5A0A075B604 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-5A0A075B604 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav7n-5A0A075B604 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-5A0A075B604 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-5A0A075B604 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-5A0A075B604 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-5A0A075B604 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-5A0A075B604 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-5A0A075B604 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-5A0A075B604 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-5A0A075B604 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav7n-5A0A075B604 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-5A0A075B604 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-5A0A075B604 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-5A0A075B604 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-5A0A075B604 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav7n-5A0A075B604 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav7n-5A0A075B604 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Trav7n-5A0A075B604 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7n-5A0A075B604 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7n-5A0A075B604 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7n-5A0A075B604 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-5A0A075B604 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-5A0A075B604 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trav7n-5A0A075B604 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.66■□□□□ 0.42
Trav7n-5A0A075B604 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7n-5A0A075B604 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7n-5A0A075B604 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7n-5A0A075B604 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.65■□□□□ 0.42
Trav7n-5A0A075B604 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav7n-5A0A075B604 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav7n-5A0A075B604 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-5A0A075B604 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-5A0A075B604 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-5A0A075B604 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav7n-5A0A075B604 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-5A0A075B604 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-5A0A075B604 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-5A0A075B604 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-5A0A075B604 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms