Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-6A0A075B603 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Trav6-6A0A075B603 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-6A0A075B603 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-6A0A075B603 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-6A0A075B603 Iqck-206ENSMUST00000208658 2891 ntBASIC16■□□□□ 0.15
Trav6-6A0A075B603 Gm4799-201ENSMUST00000095396 657 ntBASIC16■□□□□ 0.15
Trav6-6A0A075B603 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16■□□□□ 0.15
Trav6-6A0A075B603 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-6A0A075B603 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-6A0A075B603 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-6A0A075B603 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-6A0A075B603 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-6A0A075B603 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.99■□□□□ 0.15
Trav6-6A0A075B603 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-6A0A075B603 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.99■□□□□ 0.15
Trav6-6A0A075B603 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-6A0A075B603 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-6A0A075B603 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-6A0A075B603 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav6-6A0A075B603 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-6A0A075B603 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-6A0A075B603 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-6A0A075B603 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-6A0A075B603 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-6A0A075B603 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-6A0A075B603 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-6A0A075B603 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav6-6A0A075B603 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav6-6A0A075B603 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-6A0A075B603 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-6A0A075B603 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav6-6A0A075B603 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-6A0A075B603 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6-6A0A075B603 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6-6A0A075B603 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Gm7432-201ENSMUST00000210343 879 ntBASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-6A0A075B603 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-6A0A075B603 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-6A0A075B603 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav6-6A0A075B603 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav6-6A0A075B603 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-6A0A075B603 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-6A0A075B603 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav6-6A0A075B603 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-6A0A075B603 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-6A0A075B603 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-6A0A075B603 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-6A0A075B603 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms