Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Lhx9Q9WUH2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx9Q9WUH2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx9Q9WUH2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx9Q9WUH2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx9Q9WUH2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx9Q9WUH2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Lhx9Q9WUH2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx9Q9WUH2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Gm5356-201ENSMUST00000093326 615 ntBASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx9Q9WUH2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Gm4984-201ENSMUST00000115987 360 ntBASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Mir7085-201ENSMUST00000184353 66 ntBASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Gm27892-201ENSMUST00000185017 106 ntBASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.01□□□□□ -0.33
Lhx9Q9WUH2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lhx9Q9WUH2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms