Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm15393-201ENSMUST00000120499 219 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm43703-201ENSMUST00000200523 763 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm9063-201ENSMUST00000223299 582 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ClcnkaQ9WUB7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Gm21470-201ENSMUST00000187680 696 ntBASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Gm7775-201ENSMUST00000218871 853 ntBASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ClcnkaQ9WUB7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
ClcnkaQ9WUB7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
ClcnkaQ9WUB7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ClcnkaQ9WUB7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ClcnkaQ9WUB7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms