Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vcpip1Q8CDG3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Gm27430-201ENSMUST00000184585 107 ntBASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Gm44333-201ENSMUST00000197168 107 ntBASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Gm7774-201ENSMUST00000200064 533 ntBASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vcpip1Q8CDG3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Gm27622-201ENSMUST00000183779 60 ntBASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Gm5779-201ENSMUST00000218467 910 ntBASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vcpip1Q8CDG3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Gm6415-201ENSMUST00000118488 348 ntBASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms