Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm13612-201ENSMUST00000119276 390 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm44608-201ENSMUST00000206827 855 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm6013-201ENSMUST00000212264 699 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Otop1Q80VM9 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.19□□□□□ -0.3
Otop1Q80VM9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.18□□□□□ -0.3
Otop1Q80VM9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gm15371-201ENSMUST00000117057 784 ntBASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gm13385-201ENSMUST00000121089 220 ntBASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gm27514-201ENSMUST00000183692 110 ntBASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.18□□□□□ -0.3
Otop1Q80VM9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.18□□□□□ -0.3
Otop1Q80VM9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Otop1Q80VM9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.17□□□□□ -0.3
Otop1Q80VM9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.17□□□□□ -0.3
Otop1Q80VM9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.17□□□□□ -0.3
Otop1Q80VM9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Gm18054-201ENSMUST00000207539 555 ntBASIC13.17□□□□□ -0.3
Otop1Q80VM9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.17□□□□□ -0.3
Otop1Q80VM9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms