Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ldb1P70662 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.68□□□□□ -0.22
Ldb1P70662 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.68□□□□□ -0.22
Ldb1P70662 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.68□□□□□ -0.22
Ldb1P70662 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.68□□□□□ -0.22
Ldb1P70662 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ldb1P70662 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.68□□□□□ -0.22
Ldb1P70662 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ldb1P70662 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ldb1P70662 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.67□□□□□ -0.22
Ldb1P70662 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ldb1P70662 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ldb1P70662 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ldb1P70662 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Mir698-201ENSMUST00000102164 109 ntBASIC13.67□□□□□ -0.22
Ldb1P70662 Gm12585-201ENSMUST00000117307 290 ntBASIC13.67□□□□□ -0.22
Ldb1P70662 Gm13385-201ENSMUST00000121089 220 ntBASIC13.67□□□□□ -0.22
Ldb1P70662 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.67□□□□□ -0.22
Ldb1P70662 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ldb1P70662 Gm27306-201ENSMUST00000183970 107 ntBASIC13.67□□□□□ -0.22
Ldb1P70662 Gm10766-202ENSMUST00000194123 606 ntBASIC13.67□□□□□ -0.22
Ldb1P70662 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ldb1P70662 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.67□□□□□ -0.22
Ldb1P70662 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Ldb1P70662 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ldb1P70662 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.66□□□□□ -0.22
Ldb1P70662 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.66□□□□□ -0.22
Ldb1P70662 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.66□□□□□ -0.22
Ldb1P70662 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ldb1P70662 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.66□□□□□ -0.22
Ldb1P70662 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.66□□□□□ -0.22
Ldb1P70662 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.66□□□□□ -0.22
Ldb1P70662 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.66□□□□□ -0.22
Ldb1P70662 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.66□□□□□ -0.22
Ldb1P70662 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.66□□□□□ -0.22
Ldb1P70662 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.66□□□□□ -0.22
Ldb1P70662 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ldb1P70662 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.66□□□□□ -0.22
Ldb1P70662 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ldb1P70662 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.66□□□□□ -0.22
Ldb1P70662 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms