Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.09□□□□□ -0.63
Sssca1P56873 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sssca1P56873 Gm2810-201ENSMUST00000118681 990 ntBASIC11.09□□□□□ -0.63
Sssca1P56873 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.09□□□□□ -0.63
Sssca1P56873 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Gm29741-201ENSMUST00000192667 421 ntBASIC11.09□□□□□ -0.63
Sssca1P56873 Gm38225-201ENSMUST00000194001 393 ntBASIC11.09□□□□□ -0.63
Sssca1P56873 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Gm20553-201ENSMUST00000204205 844 ntBASIC11.09□□□□□ -0.63
Sssca1P56873 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Sssca1P56873 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.09□□□□□ -0.63
Sssca1P56873 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sssca1P56873 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sssca1P56873 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sssca1P56873 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.08□□□□□ -0.64
Sssca1P56873 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sssca1P56873 Gm13823-201ENSMUST00000119930 345 ntBASIC11.08□□□□□ -0.64
Sssca1P56873 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.08□□□□□ -0.64
Sssca1P56873 Gm44719-201ENSMUST00000206404 149 ntBASIC11.08□□□□□ -0.64
Sssca1P56873 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Sssca1P56873 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sssca1P56873 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sssca1P56873 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sssca1P56873 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Sssca1P56873 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.07□□□□□ -0.64
Sssca1P56873 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sssca1P56873 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.07□□□□□ -0.64
Sssca1P56873 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sssca1P56873 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sssca1P56873 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms