Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Sox1P53783 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.95□□□□□ -0.18
Sox1P53783 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Gm13123-201ENSMUST00000122173 492 ntBASIC13.95□□□□□ -0.18
Sox1P53783 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox1P53783 Gm9211-201ENSMUST00000182882 975 ntBASIC13.95□□□□□ -0.18
Sox1P53783 Gm37042-201ENSMUST00000193816 581 ntBASIC13.95□□□□□ -0.18
Sox1P53783 Gm18893-201ENSMUST00000198416 943 ntBASIC13.95□□□□□ -0.18
Sox1P53783 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.95□□□□□ -0.18
Sox1P53783 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.95□□□□□ -0.18
Sox1P53783 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox1P53783 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.95□□□□□ -0.18
Sox1P53783 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox1P53783 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox1P53783 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.95□□□□□ -0.18
Sox1P53783 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox1P53783 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox1P53783 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.94□□□□□ -0.18
Sox1P53783 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox1P53783 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Gm31256-201ENSMUST00000194705 506 ntBASIC13.94□□□□□ -0.18
Sox1P53783 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox1P53783 Gm44551-201ENSMUST00000208804 171 ntBASIC13.94□□□□□ -0.18
Sox1P53783 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Gm10752-201ENSMUST00000218348 729 ntBASIC13.94□□□□□ -0.18
Sox1P53783 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.94□□□□□ -0.18
Sox1P53783 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.94□□□□□ -0.18
Sox1P53783 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sox1P53783 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.94□□□□□ -0.18
Sox1P53783 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.94□□□□□ -0.18
Sox1P53783 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox1P53783 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox1P53783 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox1P53783 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox1P53783 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Sox1P53783 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox1P53783 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox1P53783 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox1P53783 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox1P53783 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox1P53783 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox1P53783 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Sox1P53783 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sox1P53783 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox1P53783 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox1P53783 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox1P53783 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox1P53783 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Sox1P53783 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Sox1P53783 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox1P53783 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms