Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hnf4aP49698 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Hnf4aP49698 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hnf4aP49698 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.31□□□□□ -0.28
Hnf4aP49698 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hnf4aP49698 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hnf4aP49698 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hnf4aP49698 Gm27321-201ENSMUST00000185021 205 ntBASIC13.31□□□□□ -0.28
Hnf4aP49698 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.31□□□□□ -0.28
Hnf4aP49698 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Mir497b-201ENSMUST00000093601 125 ntBASIC13.31□□□□□ -0.28
Hnf4aP49698 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hnf4aP49698 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.31□□□□□ -0.28
Hnf4aP49698 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hnf4aP49698 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Hnf4aP49698 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hnf4aP49698 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Gm13453-201ENSMUST00000118708 357 ntBASIC13.3□□□□□ -0.28
Hnf4aP49698 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Hnf4aP49698 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Hnf4aP49698 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.3□□□□□ -0.28
Hnf4aP49698 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.3□□□□□ -0.28
Hnf4aP49698 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.3□□□□□ -0.28
Hnf4aP49698 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hnf4aP49698 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hnf4aP49698 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.29□□□□□ -0.28
Hnf4aP49698 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Hnf4aP49698 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.29□□□□□ -0.28
Hnf4aP49698 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.29□□□□□ -0.28
Hnf4aP49698 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hnf4aP49698 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.29□□□□□ -0.28
Hnf4aP49698 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hnf4aP49698 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Gm10766-202ENSMUST00000194123 606 ntBASIC13.29□□□□□ -0.28
Hnf4aP49698 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.29□□□□□ -0.28
Hnf4aP49698 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.29□□□□□ -0.28
Hnf4aP49698 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hnf4aP49698 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms