Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.31□□□□□ -0.6
Cdkn1aP39689 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Gm13689-201ENSMUST00000119360 685 ntBASIC11.31□□□□□ -0.6
Cdkn1aP39689 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.31□□□□□ -0.6
Cdkn1aP39689 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Gm43433-201ENSMUST00000196573 481 ntBASIC11.31□□□□□ -0.6
Cdkn1aP39689 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkn1aP39689 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.3□□□□□ -0.6
Cdkn1aP39689 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.3□□□□□ -0.6
Cdkn1aP39689 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.3□□□□□ -0.6
Cdkn1aP39689 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkn1aP39689 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.29□□□□□ -0.6
Cdkn1aP39689 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn1aP39689 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms