Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp4P35123 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp4P35123 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp4P35123 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp4P35123 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.41□□□□□ -0.1
Usp4P35123 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp4P35123 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp4P35123 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.4□□□□□ -0.1
Usp4P35123 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Gm27622-201ENSMUST00000183779 60 ntBASIC14.4□□□□□ -0.1
Usp4P35123 Gm27920-201ENSMUST00000183953 96 ntBASIC14.4□□□□□ -0.1
Usp4P35123 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.4□□□□□ -0.1
Usp4P35123 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.4□□□□□ -0.1
Usp4P35123 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp4P35123 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.4□□□□□ -0.1
Usp4P35123 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp4P35123 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp4P35123 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Gm15957-201ENSMUST00000118893 974 ntBASIC14.39□□□□□ -0.11
Usp4P35123 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp4P35123 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.39□□□□□ -0.11
Usp4P35123 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.39□□□□□ -0.11
Usp4P35123 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.39□□□□□ -0.11
Usp4P35123 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp4P35123 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp4P35123 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp4P35123 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Usp4P35123 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.38□□□□□ -0.11
Usp4P35123 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp4P35123 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp4P35123 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp4P35123 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp4P35123 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp4P35123 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp4P35123 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp4P35123 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms