Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a2P08122 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.52□□□□□ -0.4
Col4a2P08122 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a2P08122 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a2P08122 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a2P08122 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Col4a2P08122 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a2P08122 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Col4a2P08122 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.52□□□□□ -0.41
Col4a2P08122 Gm24548-201ENSMUST00000158650 108 ntBASIC12.52□□□□□ -0.41
Col4a2P08122 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.52□□□□□ -0.41
Col4a2P08122 Gm20482-202ENSMUST00000174729 825 ntBASIC12.52□□□□□ -0.41
Col4a2P08122 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.52□□□□□ -0.41
Col4a2P08122 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.52□□□□□ -0.41
Col4a2P08122 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Col4a2P08122 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.52□□□□□ -0.41
Col4a2P08122 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.52□□□□□ -0.41
Col4a2P08122 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC12.52□□□□□ -0.41
Col4a2P08122 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Col4a2P08122 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a2P08122 Gm15370-201ENSMUST00000117158 253 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a2P08122 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.51□□□□□ -0.41
Col4a2P08122 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col4a2P08122 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col4a2P08122 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.51□□□□□ -0.41
Col4a2P08122 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Col4a2P08122 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.51□□□□□ -0.41
Col4a2P08122 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm24255-201ENSMUST00000104481 128 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Gm12363-201ENSMUST00000122250 668 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Gm28693-202ENSMUST00000190758 331 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Gm44069-201ENSMUST00000204898 506 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.51□□□□□ -0.41
Col4a2P08122 Gm6082-201ENSMUST00000215204 454 ntBASIC12.51□□□□□ -0.41
Col4a2P08122 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a2P08122 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a2P08122 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col4a2P08122 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Col4a2P08122 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col4a2P08122 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.5□□□□□ -0.41
Col4a2P08122 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col4a2P08122 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a2P08122 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col4a2P08122 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.5□□□□□ -0.41
Col4a2P08122 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.5□□□□□ -0.41
Col4a2P08122 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms