Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Cops6O88545 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Cops6O88545 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.68■□□□□ 0.26
Cops6O88545 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Cops6O88545 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.68■□□□□ 0.26
Cops6O88545 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.68■□□□□ 0.26
Cops6O88545 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.68■□□□□ 0.26
Cops6O88545 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.68■□□□□ 0.26
Cops6O88545 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.68■□□□□ 0.26
Cops6O88545 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cops6O88545 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Cops6O88545 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops6O88545 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.67■□□□□ 0.26
Cops6O88545 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.67■□□□□ 0.26
Cops6O88545 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.67■□□□□ 0.26
Cops6O88545 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cops6O88545 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cops6O88545 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Gm4271-201ENSMUST00000174444 973 ntBASIC16.67■□□□□ 0.26
Cops6O88545 Gm27572-201ENSMUST00000183702 255 ntBASIC16.67■□□□□ 0.26
Cops6O88545 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.67■□□□□ 0.26
Cops6O88545 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.67■□□□□ 0.26
Cops6O88545 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.67■□□□□ 0.26
Cops6O88545 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cops6O88545 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cops6O88545 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cops6O88545 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.67■□□□□ 0.26
Cops6O88545 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops6O88545 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cops6O88545 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cops6O88545 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cops6O88545 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Cops6O88545 Gm1335-201ENSMUST00000121653 386 ntBASIC16.66■□□□□ 0.26
Cops6O88545 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.66■□□□□ 0.26
Cops6O88545 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.66■□□□□ 0.26
Cops6O88545 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.66■□□□□ 0.26
Cops6O88545 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Gm27682-201ENSMUST00000183930 110 ntBASIC16.66■□□□□ 0.26
Cops6O88545 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.66■□□□□ 0.26
Cops6O88545 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.66■□□□□ 0.26
Cops6O88545 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Cops6O88545 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cops6O88545 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Cops6O88545 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.66■□□□□ 0.26
Cops6O88545 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cops6O88545 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops6O88545 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cops6O88545 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.65■□□□□ 0.26
Cops6O88545 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cops6O88545 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.65■□□□□ 0.26
Cops6O88545 Gm13369-201ENSMUST00000119442 987 ntBASIC16.65■□□□□ 0.26
Cops6O88545 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.65■□□□□ 0.26
Cops6O88545 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.65■□□□□ 0.26
Cops6O88545 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cops6O88545 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms