Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4lE9Q2N0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gm43094-201ENSMUST00000196549 921 ntBASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cpsf4lE9Q2N0 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms