Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Gm26956-201ENSMUST00000182176 986 ntBASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Gm8885-201ENSMUST00000189382 598 ntBASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Gm29787-201ENSMUST00000222129 849 ntBASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Gm9678-201ENSMUST00000198979 1149 ntBASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hfm1D3Z4R1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gm14208-201ENSMUST00000119645 678 ntBASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gm34767-201ENSMUST00000191813 1062 ntBASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gm4366-201ENSMUST00000201488 1342 ntBASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gm4760-201ENSMUST00000119663 1030 ntBASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gm22334-201ENSMUST00000158070 133 ntBASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gm22121-201ENSMUST00000175148 54 ntBASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC18.91■□□□□ 0.62
Hfm1D3Z4R1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Gm7899-201ENSMUST00000192935 1897 ntBASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Gm14277-201ENSMUST00000121195 360 ntBASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Gm17208-201ENSMUST00000168388 535 ntBASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Mir6927-201ENSMUST00000184494 71 ntBASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Gm5950-201ENSMUST00000213337 772 ntBASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Gm19208-201ENSMUST00000213861 912 ntBASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC18.9■□□□□ 0.62
Hfm1D3Z4R1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms