Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trim30cD3YVI9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.03■□□□□ -0
Trim30cD3YVI9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.03■□□□□ -0
Trim30cD3YVI9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.03■□□□□ -0
Trim30cD3YVI9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.03■□□□□ -0
Trim30cD3YVI9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim30cD3YVI9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.03■□□□□ -0
Trim30cD3YVI9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim30cD3YVI9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim30cD3YVI9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Trim30cD3YVI9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.02■□□□□ -0
Trim30cD3YVI9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.02■□□□□ -0
Trim30cD3YVI9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.02■□□□□ -0
Trim30cD3YVI9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.02■□□□□ -0
Trim30cD3YVI9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Gm28630-201ENSMUST00000187806 498 ntBASIC15.02■□□□□ -0
Trim30cD3YVI9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.02■□□□□ -0
Trim30cD3YVI9 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.02■□□□□ -0
Trim30cD3YVI9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim30cD3YVI9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Trim30cD3YVI9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Gm27618-201ENSMUST00000183671 60 ntBASIC15.01□□□□□ -0.01
Trim30cD3YVI9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim30cD3YVI9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim30cD3YVI9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trim30cD3YVI9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Trim30cD3YVI9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim30cD3YVI9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim30cD3YVI9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim30cD3YVI9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
Trim30cD3YVI9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim30cD3YVI9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15□□□□□ -0.01
Trim30cD3YVI9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15□□□□□ -0.01
Trim30cD3YVI9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms