Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm7862-201ENSMUST00000121461 292 ntBASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm34391-201ENSMUST00000203706 907 ntBASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.4□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm4899-201ENSMUST00000178708 719 ntBASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Olfr286-202ENSMUST00000205305 969 ntBASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms