Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Ska1Q9CPV1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Mir1895-201ENSMUST00000122615 79 ntBASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ska1Q9CPV1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Gm27494-201ENSMUST00000184735 189 ntBASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 AW822252-206ENSMUST00000208904 237 ntBASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms