Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim37Q6PCX9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim37Q6PCX9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Mir125a-201ENSMUST00000083545 68 ntBASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim37Q6PCX9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Gm15393-201ENSMUST00000120499 219 ntBASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Gm45098-201ENSMUST00000207179 657 ntBASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim37Q6PCX9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.27■□□□□ 0.03
Trim37Q6PCX9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim37Q6PCX9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms