Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Gm37935-201ENSMUST00000192012 982 ntBASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Gm18049-201ENSMUST00000208909 581 ntBASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcd3Q6P9Z1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Gm27494-201ENSMUST00000184735 189 ntBASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Gm45453-201ENSMUST00000211758 853 ntBASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcd3Q6P9Z1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Gm18889-201ENSMUST00000174284 929 ntBASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Gm2213-201ENSMUST00000197485 688 ntBASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms