Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5d-4Q5R1F6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav5d-4Q5R1F6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav5d-4Q5R1F6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Gm9229-201ENSMUST00000222777 126 ntBASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5d-4Q5R1F6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav5d-4Q5R1F6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.83□□□□□ -0.51
Trav5d-4Q5R1F6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav5d-4Q5R1F6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gm13616-201ENSMUST00000120600 222 ntBASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gm17837-201ENSMUST00000186435 985 ntBASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gm6888-201ENSMUST00000221983 706 ntBASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Mir497b-201ENSMUST00000093601 125 ntBASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5d-4Q5R1F6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms