Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm5100-201ENSMUST00000195631 589 ntBASIC7.08□□□□□ -1.28
Ush2AQ2QI47 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm11578-201ENSMUST00000118530 459 ntBASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm28071-201ENSMUST00000190355 478 ntBASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm11978-201ENSMUST00000122315 466 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm27530-201ENSMUST00000184096 98 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm28693-202ENSMUST00000190758 331 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 BC037039-201ENSMUST00000192003 2205 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm2673-201ENSMUST00000120958 1608 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Mir744-201ENSMUST00000103261 100 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm13809-201ENSMUST00000117921 597 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 AC154436.1-201ENSMUST00000227272 782 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm6831-202ENSMUST00000213025 1673 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm12453-201ENSMUST00000121981 331 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm26368-201ENSMUST00000157826 118 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm9625-201ENSMUST00000180422 955 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Gm26957-201ENSMUST00000182645 977 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 n-R5s77-201ENSMUST00000083757 119 ntBASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ush2AQ2QI47 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Gm12516-201ENSMUST00000120819 385 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 AC131997.1-201ENSMUST00000228611 1229 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Mir326-201ENSMUST00000083637 95 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms