Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC23.57■■□□□ 1.36
CLTCL1P53675 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC23.57■■□□□ 1.36
CLTCL1P53675 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC23.57■■□□□ 1.36
CLTCL1P53675 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CLTCL1P53675 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC23.57■■□□□ 1.36
CLTCL1P53675 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC23.57■■□□□ 1.36
CLTCL1P53675 SERBP1P3-201ENST00000459980 809 ntBASIC23.57■■□□□ 1.36
CLTCL1P53675 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 FTH1-202ENST00000526640 786 ntTSL 2 BASIC23.57■■□□□ 1.36
CLTCL1P53675 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 NOP2-220ENST00000545915 630 ntTSL 2 BASIC23.57■■□□□ 1.36
CLTCL1P53675 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC23.57■■□□□ 1.36
CLTCL1P53675 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC23.57■■□□□ 1.36
CLTCL1P53675 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC23.57■■□□□ 1.36
CLTCL1P53675 AC008494.3-201ENST00000606615 944 ntBASIC23.57■■□□□ 1.36
CLTCL1P53675 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC23.57■■□□□ 1.36
CLTCL1P53675 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.57■■□□□ 1.36
CLTCL1P53675 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC23.56■■□□□ 1.36
CLTCL1P53675 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CLTCL1P53675 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CLTCL1P53675 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC23.56■■□□□ 1.36
CLTCL1P53675 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC23.56■■□□□ 1.36
CLTCL1P53675 AC093004.1-201ENST00000508850 424 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CLTCL1P53675 AC055876.2-201ENST00000531834 546 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC23.56■■□□□ 1.36
CLTCL1P53675 AC023310.3-201ENST00000557027 670 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC23.56■■□□□ 1.36
CLTCL1P53675 AC100756.1-201ENST00000562736 682 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 AC138749.3-201ENST00000567691 622 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 CHCHD2P3-201ENST00000603038 451 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 AC116165.1-201ENST00000611806 668 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC23.56■■□□□ 1.36
CLTCL1P53675 AC138969.3-201ENST00000546612 1459 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 AC138932.2-201ENST00000548268 1459 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 AC126755.4-201ENST00000549796 1459 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 AC006538.1-201ENST00000567905 1585 ntBASIC23.56■■□□□ 1.36
CLTCL1P53675 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CLTCL1P53675 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC23.56■■□□□ 1.36
CLTCL1P53675 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLTCL1P53675 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CLTCL1P53675 RAD18-204ENST00000418463 563 ntTSL 4 BASIC23.55■■□□□ 1.36
CLTCL1P53675 RAD18-205ENST00000421052 582 ntTSL 3 BASIC23.55■■□□□ 1.36
CLTCL1P53675 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC23.55■■□□□ 1.36
CLTCL1P53675 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CLTCL1P53675 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CLTCL1P53675 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CLTCL1P53675 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
CLTCL1P53675 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLTCL1P53675 AC004461.2-201ENST00000629517 803 ntBASIC23.55■■□□□ 1.36
CLTCL1P53675 AL033527.5-202ENST00000641632 1098 ntBASIC23.55■■□□□ 1.36
CLTCL1P53675 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.55■■□□□ 1.36
CLTCL1P53675 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC23.55■■□□□ 1.36
CLTCL1P53675 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC23.55■■□□□ 1.36
CLTCL1P53675 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CLTCL1P53675 AL391825.1-201ENST00000457671 1364 ntBASIC23.55■■□□□ 1.36
CLTCL1P53675 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CLTCL1P53675 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLTCL1P53675 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC23.55■■□□□ 1.36
CLTCL1P53675 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC23.55■■□□□ 1.36
CLTCL1P53675 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC23.55■■□□□ 1.36
CLTCL1P53675 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CLTCL1P53675 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC23.55■■□□□ 1.36
CLTCL1P53675 EEF1DP4-201ENST00000446006 880 ntBASIC23.55■■□□□ 1.36
CLTCL1P53675 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CLTCL1P53675 POLE2-203ENST00000553805 496 ntTSL 2 BASIC23.55■■□□□ 1.36
CLTCL1P53675 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC23.55■■□□□ 1.36
CLTCL1P53675 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CLTCL1P53675 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CLTCL1P53675 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
CLTCL1P53675 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC23.54■■□□□ 1.36
CLTCL1P53675 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CLTCL1P53675 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CLTCL1P53675 TMEM14DP-201ENST00000422205 345 ntBASIC23.54■■□□□ 1.36
CLTCL1P53675 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC23.54■■□□□ 1.36
CLTCL1P53675 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms