Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.34□□□□□ -0.27
Hnf4aP49698 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Hnf4aP49698 Gm4804-201ENSMUST00000182234 999 ntBASIC13.34□□□□□ -0.27
Hnf4aP49698 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.34□□□□□ -0.27
Hnf4aP49698 Gm27618-201ENSMUST00000183671 60 ntBASIC13.34□□□□□ -0.27
Hnf4aP49698 Gm27680-201ENSMUST00000184192 160 ntBASIC13.34□□□□□ -0.27
Hnf4aP49698 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.34□□□□□ -0.27
Hnf4aP49698 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.34□□□□□ -0.27
Hnf4aP49698 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.34□□□□□ -0.27
Hnf4aP49698 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hnf4aP49698 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hnf4aP49698 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Hnf4aP49698 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.34□□□□□ -0.27
Hnf4aP49698 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hnf4aP49698 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hnf4aP49698 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hnf4aP49698 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hnf4aP49698 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hnf4aP49698 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hnf4aP49698 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hnf4aP49698 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.33□□□□□ -0.27
Hnf4aP49698 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hnf4aP49698 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hnf4aP49698 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Mir698-201ENSMUST00000102164 109 ntBASIC13.33□□□□□ -0.28
Hnf4aP49698 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Gm15393-201ENSMUST00000120499 219 ntBASIC13.33□□□□□ -0.28
Hnf4aP49698 Gm3436-201ENSMUST00000179930 840 ntBASIC13.33□□□□□ -0.28
Hnf4aP49698 Gm44344-201ENSMUST00000200287 129 ntBASIC13.33□□□□□ -0.28
Hnf4aP49698 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hnf4aP49698 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hnf4aP49698 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hnf4aP49698 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Hnf4aP49698 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hnf4aP49698 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.33□□□□□ -0.28
Hnf4aP49698 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hnf4aP49698 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hnf4aP49698 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Hnf4aP49698 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Hnf4aP49698 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Gm12585-201ENSMUST00000117307 290 ntBASIC13.32□□□□□ -0.28
Hnf4aP49698 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.32□□□□□ -0.28
Hnf4aP49698 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.32□□□□□ -0.28
Hnf4aP49698 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Gm17837-201ENSMUST00000186435 985 ntBASIC13.32□□□□□ -0.28
Hnf4aP49698 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.32□□□□□ -0.28
Hnf4aP49698 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.32□□□□□ -0.28
Hnf4aP49698 Gm5425-201ENSMUST00000214125 459 ntBASIC13.32□□□□□ -0.28
Hnf4aP49698 Gm6888-201ENSMUST00000221983 706 ntBASIC13.32□□□□□ -0.28
Hnf4aP49698 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hnf4aP49698 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Hnf4aP49698 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hnf4aP49698 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms