Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abca1P41233 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Abca1P41233 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.44□□□□□ -0.58
Abca1P41233 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.44□□□□□ -0.58
Abca1P41233 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.44□□□□□ -0.58
Abca1P41233 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Abca1P41233 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.44□□□□□ -0.58
Abca1P41233 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.44□□□□□ -0.58
Abca1P41233 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.44□□□□□ -0.58
Abca1P41233 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Gm5425-201ENSMUST00000214125 459 ntBASIC11.44□□□□□ -0.58
Abca1P41233 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.44□□□□□ -0.58
Abca1P41233 Gm10012-201ENSMUST00000078252 192 ntBASIC11.44□□□□□ -0.58
Abca1P41233 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.44□□□□□ -0.58
Abca1P41233 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.44□□□□□ -0.58
Abca1P41233 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Abca1P41233 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Abca1P41233 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.44□□□□□ -0.58
Abca1P41233 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abca1P41233 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.43□□□□□ -0.58
Abca1P41233 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.43□□□□□ -0.58
Abca1P41233 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.43□□□□□ -0.58
Abca1P41233 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.43□□□□□ -0.58
Abca1P41233 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Abca1P41233 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.43□□□□□ -0.58
Abca1P41233 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Abca1P41233 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.43□□□□□ -0.58
Abca1P41233 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.43□□□□□ -0.58
Abca1P41233 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Abca1P41233 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.43□□□□□ -0.58
Abca1P41233 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Abca1P41233 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.43□□□□□ -0.58
Abca1P41233 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.43□□□□□ -0.58
Abca1P41233 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.43□□□□□ -0.58
Abca1P41233 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Abca1P41233 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.43□□□□□ -0.58
Abca1P41233 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Abca1P41233 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abca1P41233 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms