Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.67□□□□□ -0.38
Nedd8P29595 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.67□□□□□ -0.38
Nedd8P29595 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.67□□□□□ -0.38
Nedd8P29595 Gm10275-202ENSMUST00000168697 495 ntBASIC12.67□□□□□ -0.38
Nedd8P29595 Gm5682-201ENSMUST00000173402 505 ntBASIC12.67□□□□□ -0.38
Nedd8P29595 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Gm45747-201ENSMUST00000212203 999 ntBASIC12.67□□□□□ -0.38
Nedd8P29595 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.67□□□□□ -0.38
Nedd8P29595 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nedd8P29595 Gm10275-201ENSMUST00000092620 635 ntBASIC12.67□□□□□ -0.38
Nedd8P29595 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.67□□□□□ -0.38
Nedd8P29595 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.67□□□□□ -0.38
Nedd8P29595 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nedd8P29595 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.67□□□□□ -0.38
Nedd8P29595 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd8P29595 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.66□□□□□ -0.38
Nedd8P29595 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nedd8P29595 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nedd8P29595 Gm15372-201ENSMUST00000120729 834 ntBASIC12.66□□□□□ -0.38
Nedd8P29595 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nedd8P29595 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.66□□□□□ -0.38
Nedd8P29595 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.66□□□□□ -0.38
Nedd8P29595 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Nedd8P29595 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.66□□□□□ -0.38
Nedd8P29595 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.66□□□□□ -0.38
Nedd8P29595 Matn2-203ENSMUST00000226766 3252 ntBASIC12.66□□□□□ -0.38
Nedd8P29595 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nedd8P29595 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd8P29595 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nedd8P29595 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.65□□□□□ -0.38
Nedd8P29595 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd8P29595 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Nedd8P29595 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd8P29595 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.65□□□□□ -0.38
Nedd8P29595 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Nedd8P29595 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd8P29595 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd8P29595 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.65□□□□□ -0.38
Nedd8P29595 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.65□□□□□ -0.38
Nedd8P29595 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nedd8P29595 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms