Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.38□□□□□ -0.27
Tspan6O70401 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Tspan6O70401 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Tspan6O70401 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.38□□□□□ -0.27
Tspan6O70401 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.38□□□□□ -0.27
Tspan6O70401 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Tspan6O70401 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tspan6O70401 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.38□□□□□ -0.27
Tspan6O70401 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tspan6O70401 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tspan6O70401 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Tspan6O70401 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Tspan6O70401 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.37□□□□□ -0.27
Tspan6O70401 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.37□□□□□ -0.27
Tspan6O70401 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Gm24644-201ENSMUST00000157114 139 ntBASIC13.37□□□□□ -0.27
Tspan6O70401 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.37□□□□□ -0.27
Tspan6O70401 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.37□□□□□ -0.27
Tspan6O70401 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Tspan6O70401 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tspan6O70401 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tspan6O70401 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Tspan6O70401 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tspan6O70401 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.37□□□□□ -0.27
Tspan6O70401 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tspan6O70401 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tspan6O70401 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.36□□□□□ -0.27
Tspan6O70401 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tspan6O70401 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.36□□□□□ -0.27
Tspan6O70401 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Tspan6O70401 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Gm5687-201ENSMUST00000118252 640 ntBASIC13.36□□□□□ -0.27
Tspan6O70401 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.36□□□□□ -0.27
Tspan6O70401 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.36□□□□□ -0.27
Tspan6O70401 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Itm2b-204ENSMUST00000228637 783 ntBASIC13.36□□□□□ -0.27
Tspan6O70401 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.36□□□□□ -0.27
Tspan6O70401 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.36□□□□□ -0.27
Tspan6O70401 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.36□□□□□ -0.27
Tspan6O70401 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tspan6O70401 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.36□□□□□ -0.27
Tspan6O70401 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tspan6O70401 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tspan6O70401 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tspan6O70401 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms