Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Matn3O35701 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.49□□□□□ -0.41
Matn3O35701 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Matn3O35701 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Matn3O35701 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Matn3O35701 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Matn3O35701 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Matn3O35701 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Matn3O35701 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Matn3O35701 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Matn3O35701 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Matn3O35701 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Matn3O35701 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.49□□□□□ -0.41
Matn3O35701 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.49□□□□□ -0.41
Matn3O35701 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.49□□□□□ -0.41
Matn3O35701 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.48□□□□□ -0.41
Matn3O35701 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Matn3O35701 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Matn3O35701 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Matn3O35701 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.48□□□□□ -0.41
Matn3O35701 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.48□□□□□ -0.41
Matn3O35701 Gm16026-204ENSMUST00000162652 683 ntBASIC12.48□□□□□ -0.41
Matn3O35701 Gm6550-201ENSMUST00000187574 993 ntBASIC12.48□□□□□ -0.41
Matn3O35701 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.48□□□□□ -0.41
Matn3O35701 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.48□□□□□ -0.41
Matn3O35701 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Matn3O35701 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.48□□□□□ -0.41
Matn3O35701 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.48□□□□□ -0.41
Matn3O35701 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.48□□□□□ -0.41
Matn3O35701 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.48□□□□□ -0.41
Matn3O35701 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Matn3O35701 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.48□□□□□ -0.41
Matn3O35701 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Matn3O35701 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.47□□□□□ -0.41
Matn3O35701 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.47□□□□□ -0.41
Matn3O35701 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Matn3O35701 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Matn3O35701 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 Gm11594-201ENSMUST00000122313 162 ntBASIC12.47□□□□□ -0.41
Matn3O35701 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.47□□□□□ -0.41
Matn3O35701 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.47□□□□□ -0.41
Matn3O35701 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.47□□□□□ -0.41
Matn3O35701 Gm45167-201ENSMUST00000208007 322 ntBASIC12.47□□□□□ -0.41
Matn3O35701 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Matn3O35701 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.47□□□□□ -0.41
Matn3O35701 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Matn3O35701 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms