Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SrfQ9JM73 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SrfQ9JM73 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SrfQ9JM73 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SrfQ9JM73 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SrfQ9JM73 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SrfQ9JM73 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SrfQ9JM73 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SrfQ9JM73 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SrfQ9JM73 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SrfQ9JM73 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SrfQ9JM73 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.95□□□□□ -0.34
SrfQ9JM73 Gm13369-201ENSMUST00000119442 987 ntBASIC12.95□□□□□ -0.34
SrfQ9JM73 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.95□□□□□ -0.34
SrfQ9JM73 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.95□□□□□ -0.34
SrfQ9JM73 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
SrfQ9JM73 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Gm9368-201ENSMUST00000219348 831 ntBASIC12.95□□□□□ -0.34
SrfQ9JM73 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.95□□□□□ -0.34
SrfQ9JM73 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SrfQ9JM73 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.95□□□□□ -0.34
SrfQ9JM73 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SrfQ9JM73 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm42535-201ENSMUST00000197312 1399 ntBASIC12.94□□□□□ -0.34
SrfQ9JM73 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm15236-201ENSMUST00000117309 379 ntBASIC12.94□□□□□ -0.34
SrfQ9JM73 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm11793-201ENSMUST00000120433 981 ntBASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm25927-201ENSMUST00000175058 117 ntBASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm27516-201ENSMUST00000184237 98 ntBASIC12.94□□□□□ -0.34
SrfQ9JM73 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm45930-201ENSMUST00000221330 292 ntBASIC12.94□□□□□ -0.34
SrfQ9JM73 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm18719-201ENSMUST00000196696 1413 ntBASIC12.94□□□□□ -0.34
SrfQ9JM73 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms