Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.37□□□□□ -0.11
Cpne8Q9DC53 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cpne8Q9DC53 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Gm15653-201ENSMUST00000119247 907 ntBASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Gm17837-201ENSMUST00000186435 985 ntBASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Gm44344-201ENSMUST00000200287 129 ntBASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpne8Q9DC53 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Gm25144-201ENSMUST00000179561 110 ntBASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Gm25352-201ENSMUST00000179815 110 ntBASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Gm27321-201ENSMUST00000185021 205 ntBASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Gm7775-201ENSMUST00000218871 853 ntBASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpne8Q9DC53 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms