Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rsph3bQ9DA80 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm4984-201ENSMUST00000115987 360 ntBASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm13829-201ENSMUST00000119600 138 ntBASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm15376-201ENSMUST00000122258 783 ntBASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm8584-201ENSMUST00000171982 758 ntBASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm27892-201ENSMUST00000185017 106 ntBASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rsph3bQ9DA80 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Mir698-201ENSMUST00000102164 109 ntBASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Gm12485-201ENSMUST00000119641 291 ntBASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Gm15429-201ENSMUST00000151268 798 ntBASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Gm17150-201ENSMUST00000165577 381 ntBASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Gm6266-201ENSMUST00000203844 806 ntBASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rsph3bQ9DA80 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rsph3bQ9DA80 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms