Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd1Q9CQX5 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm12403-201ENSMUST00000121384 959 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm7046-201ENSMUST00000221351 977 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldnd1Q9CQX5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Gm13123-201ENSMUST00000122173 492 ntBASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Rps4l-202ENSMUST00000204242 789 ntBASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldnd1Q9CQX5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldnd1Q9CQX5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Cldnd1Q9CQX5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.99□□□□□ -0.17
Cldnd1Q9CQX5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldnd1Q9CQX5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldnd1Q9CQX5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cldnd1Q9CQX5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms